CDS
| Accession Number | TCMCG007C57988 |
| gbkey | CDS |
| Protein Id | XP_009116998.2 |
| Location | complement(join(38353909..38353998,38354095..38354333,38354554..38354625,38354628..38354796,38354876..38355007,38355431..38355495,38355498..38355594,38355704..38355759,38355838..38356051,38356131..38356316,38356540..38356632,38356739..38357291,38357387..38357514,38357593..38357625,38357627..38357715,38357838..38357880,38358175..38358294,38358376..38358473,38358663..38358720,38358806..38358911,38358994..38359030,38359116..38359212,38359300..38359422,38359510..38359555,38359665..38359981)) |
| Gene | LOC103842135 |
| GeneID | 103842135 |
| Organism | Brassica rapa |
Protein
| Length | 1088aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009118750.3 |
| Definition | LOW QUALITY PROTEIN: protein transport protein SEC31 homolog B [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Protein transport protein SEC31 homolog |
| KEGG_TC | - |
| KEGG_Module |
M00404
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14005
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04141
[VIEW IN KEGG] map04141 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0005911 [VIEW IN EMBL-EBI] GO:0009506 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0030054 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0055044 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTTGCATCAAGGGGGTGGGCAGATCCGCCTCCGTGGCGCTGGCTCCCGATGCTCCTTACATGGCCGCCGGTACCATGGCCGGAGCGGTGGACCTCTCCTTTAGCTCTTCCGCTAATCTCGAGATCTTCAAGCTCGATTTCCAGTCCGACGAGCGCGAGTTGACGCTGGTCGGGGAAATCCCCAGCTCGGAGCGGTTCCACAGACTCGCGTGGGGGAAAAATGGATCTGGATCCGAGGAATTCTCGTTGGGCCTTATCGCCGGCGGGCTTGTCGATGGGAATATAGATCTGTGGAATCCTCTCTCTTTAATCGGCTCCGAGTCCGCACTCGCTGGACATCTATCGGTTCACAAAGGACCCGTTCGTGGTCTGGAGTTTAATGCAATCGCCCCAAATCTACTCGCCTCTGGGGCTGATGATGGTGAAATTTGCATTTGGGATTTAACTAAGCCTTCGGAGCCTTCTCATTTTCCACTTCTCAAGGGTAGTGGTTCCGCCACGCAAGGTGAAATCTCATTTATATCGTGGAATAGAAAAGTTCAACAGATATTAGCATCTACCTCCTACAATGGGACTACTGCAATATGGGACTTGAGGAAGCAGAAGCCTATTATTAACTTTGCAGATTCAGTTCGTCGCCGGTGCTCTGTTTTACAATGGAACCCTGACATTGCTACTCAGATTATGGTTGCTTCAGATGACGACAGCTCACCTACTCTCAAGCTCTGGGACATGAGAAACACAATGTCACCTGTGCGCGAGTTTACTGGACACCAAAAAGGTGTGATTGCAATGGAGTGGTGTCCGAGTGACAGCTCATATCTTCTCACCTGTGCTAAGGACAACCGAACTATTTGCTGGGACACTAATACAGCAGAGATTGTGGCTGAGTTACCTGCTGGCAACAACTGGAATTTTGATGTTCATTGGTACCCAAAGATACCTGGAGTTATATCAGCATCTTCATTTGACGGGAAAATTGGTATCTACAACATCGAGGGTTGCAGTCGCTATGGTGCTGAAGAGAATAATTTGAGTACTGCTTGTTTAAGAGCACCAAAATGGTATAAGCGCCCGGTTGGTGCATCTTTTGGATTTGGGGGAAAGCTTGTATCGTTTCACGCAAAGGCCCCTCCGAAGGGGGCCTCTAGCATTCCGTCTGAGGTGTTTTTGCACAGCCTGGCAACTGAACAGAGTTTGGTGAGTCGAACTTCTGAATTTGAAGCCGCCATAGAAAATGGAGATAAGACTTCTCTAAGGGGTTTATGTGGGAAGAAATCTGAAGAGACTGAATCCGAAGAGGAGAAGGAGACATGGAGCTTGCTGAAAATCATGTTCGAAGAGGAAGGAACGACAAGGACAAAGTTGATCAGCCATCTTGGCTTTAGTTTACCTTCTGTGGAAAAGGATCATGCAGTAGATGCGCTCTCGTCAGATCTGAATGGCATTGGATTAGAGGATACTGCACCTGAGCCTGTGAAAATTAACGAGGCAGCTGCATTTGCTATGGACAATGGAGAAGACTTTTTCGACAACTTTCCTTCTAAACCGGATACACCCGTATCTACATCCTCCAAAGATTTTATGCCTCCTGACACAGATTCTTCTGCCAAAGTGGAAGAAACTCAAGAAATACCAGAAGAAGAGGAAGAAGGTTCTGACAAAGTATTTGATGATGCCATCCAGAGTGCTTTAGTTGTTGGAAATTACAATGAAGCGGTGGATCAGTGTATATCTGCAAATAAGATGGCTGATGCTTTAGTTATAGCTCATGTTGGTGGTACATCATTGTGGGAGAGTACTCGTGAGAAATATTTGAAGACGAGTGGTGCGCCTTACATGAAGATTGTTTCTGCGATGGTGAACAACGATCTCACGAGCCTTATTTATACAAGGTCGCTTAAGTTCTGGAAAGAAACTCTTGCTCTTCTCTGTACTTTTGCACAAGGAGAACAATGGGCCAGCCTTTGCGATGTCCTTGCCTCAAAGTTGATGGCTGCTGGTAACACTTTGGCTGCAGTTTTCTGCTACATATGCGCAGGCAATGTTGACAGAACAGTAGAAATTTGGTCGAGGAGCCTTGCAAACGATCGCGATGGAAGATCTTATGCCGAGCTTCTTCAAGATCTTATGGAGAAGACTCTTGTCCTTGCTTTGGCAACTGGCAACAAAAAGTTCAGCGCATCTCTATGTAAACTATTTGAGAGTTATGCTGAGATATTGGCCAGCCAAGGGCTTCTTACAACGGCAATGAAGTACTTGAAAGTTCTTGATTCTGGTGGCTTGTCACTTGAACTTTCCATATTACGTGACCGTATTTCTCTTTCTGCGGAGCCTGAGACTAACGCTGCAGCTTCAGGCACTCAGCTTCAAAGCACCATACCGTATAATCAGGAGCCAACTCAGGCGCAACCAAACGTTCTTAGTAACCCATATGATAATCAGTATCAGCAACCATACACCGATTCTTATGTCGGAGGATATGTTCCTCCTTCACATGCGCCCATGCAGCAATCAACCATGTTTATGCCTCACCAAGCTCAGCCAGCTCCGCAGCCGTCTTATCCTCCGGCTCCTGCAAGCAATGCTCAGCCATCCATGAGAACCACTTTTGTTCCTTCAACTCCCCCTGCACTGAAGAACGCAGACCAATATCAGCAGCCATTCGTTGGTTTTCATTCATTCACAGGACCATCCAACAATGCATACCCTGTTCCCCCGGCTCCAAATTCATATGTACCTCCTGGCCCCTCACAAGTTGGGCAAAATCTTAACCCGATGATGCCCCAAGCCGTTGCTCCAGGAGCTGGAGCCATAGGATTTACGCCTATGTCAGCTCCAGGAGTTGCTCCAAGATAACAGCAGGCGACCCCTGCCCCTGCAGCTCCGCCACCAACTGTTCAGACTGCAGATACTTCCAACGTCCCAGCCCACCAGAAACCTGTGATAGCAACATTGACAAGGCTATTCAATGAAACATCGGAAGCACTGGGAGGCGCACGTGCAAATCCTTCCAAAAAGCGTGAGATAGAAGATAACTCAAGAAAATTAGGTGCTCTGTTTGTGAAACTCAATAGCGGAGATATCTCCAAGAATGCTGCAGACAAACTCGCGCAGCTCTGCCATGCTCTGGACAGTCATGACTTCGGTGCAGCCCTTCAGCTACAGGTACTTCTGACGACCAGCGAATGGGATGAATGCAACTTCTGGCTGTCGACGCTAAAGCGGATGATCAAGGCCAGGCAAAGTATGCGGTGA |
| Protein: MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDERELTLVGEIPSSERFHRLAWGKNGSGSEEFSLGLIAGGLVDGNIDLWNPLSLIGSESALAGHLSVHKGPVRGLEFNAIAPNLLASGADDGEICIWDLTKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTAIWDLRKQKPIINFADSVRRRCSVLQWNPDIATQIMVASDDDSSPTLKLWDMRNTMSPVREFTGHQKGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEENNLSTACLRAPKWYKRPVGASFGFGGKLVSFHAKAPPKGASSIPSEVFLHSLATEQSLVSRTSEFEAAIENGDKTSLRGLCGKKSEETESEEEKETWSLLKIMFEEEGTTRTKLISHLGFSLPSVEKDHAVDALSSDLNGIGLEDTAPEPVKINEAAAFAMDNGEDFFDNFPSKPDTPVSTSSKDFMPPDTDSSAKVEETQEIPEEEEEGSDKVFDDAIQSALVVGNYNEAVDQCISANKMADALVIAHVGGTSLWESTREKYLKTSGAPYMKIVSAMVNNDLTSLIYTRSLKFWKETLALLCTFAQGEQWASLCDVLASKLMAAGNTLAAVFCYICAGNVDRTVEIWSRSLANDRDGRSYAELLQDLMEKTLVLALATGNKKFSASLCKLFESYAEILASQGLLTTAMKYLKVLDSGGLSLELSILRDRISLSAEPETNAAASGTQLQSTIPYNQEPTQAQPNVLSNPYDNQYQQPYTDSYVGGYVPQXSHAPMQQSTMFMPHQAQPAPQPSYPPAPASNAQPSMRTTFVPSTPPALKNADQYQQPFVGFHSFTGPSNNAYPVPPAPNSYVPPGPSQVGQNLNPMMPQAVAPGAGAIGFTPMSAPGVAPRSXQQATPAPAAPPPTVQTADTSNVPAHQKPVIATLTRLFNETSEALGGARANPSKKREIEDNSRKLGALFVKLNSGDISKNAADKLAQLCHALDSHDFGAALQLQVLLTTSEWDECNFWLSTLKRMIKARQSMR |